Phage OD deviation — Rapid Analysis

control (no phage) T5 — 84 T7 — 58 T4D — 58 T3 — 52 TuIa — 51 T4D r48 — 41 T2 — 40 T6 — 34 RB63 — 26 RB42 — 24 RB40 — 20 r48 — 7 T4 r48 — 6 S — 4 P — 3 C−T = median control minus treatment before TD, as a percentage of the control landmarks: solid dark = TD_stat, the 5% crossing, shaded to two sigma · blue dotted = DO, deviation onset · green dashed = TD_multi · grey dotted = OD_max. The three thresholds are not commensurable: TD_stat is 5% of the control's OD, TD_multi is 5% of the control's peak rate, and TD_uni is a 20% drop from the treatment's own peak rate. TDalt — amber dash-dot, and shown only on records where the multivariate detector found no crossing. The first time the treated culture had achieved less than 95% of the growth its control achieved over the same interval. A fallback, not a substitute: where TD_multi exists it is the better landmark and TDalt is not drawn. headline — the calculator's single best threshold deviation for this record, with the landmark it chose and why on hover. Computed by the calculator itself, not re-derived here, so the two always agree. lysis inhibited / rapid lysis — phenotype judged from this curve alone: the transition width from OD_max to nadir, tested only where the starting control density is low enough for the two phenotypes to separate. Curves started above that density are not labelled at all, since a long transition is common to both there. spread — the range of DO, TD_multi and TD_stat where all three exist. A separate question from precision: a record can pin its own crossing to three minutes and be contradicted by the other two landmarks by three hours, and a record with a wide interval can still have all three estimators agreeing within a few minutes. P precision, left border · A accuracy, right border · teal high, amber caution, red low precision \u2014 how tightly the record pins its own crossing: high · caution, two-sigma interval wider than 20 min · low, no crossing, or the baseline window is falling steeply, or the threshold sits inside the noise accuracy \u2014 whether the crossing can track killing at all, set by the control's growth rate there: high, control doubling under 2 h · caution, 2 to 6 h · low, over 6 h, or a measurable multivariate value fires more than an hour earlier ▲ a curve runs above the top of the panel — expected on the default y span, which scales to the treatment curve and lets the phage-free control run off the top · ▼ a curve runs below the bottom · ▸ the record continues past the x span

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